Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927117.1_cds_XP_016475004.1_66974
CDS Infomation

[gene=LOC107796720] [db_xref=GeneID:107796720] [protein=protein indeterminate-domain 2-like] [protein_id=XP_016475004.1] [location=join(17306..17516,18142..18538,18964..19238,19538..20217)] [gbkey=CDS]
Sequence

ATGTCAAATATTTCAGGTGAAGAAGGCAGTTTCTCTTCAGGGAACACTGGAGAAGAAGTT
CAGAAACATAATCAAGCAGCCCATTTGAAGACTTCCAATAATATTTCCTCTATTACTTCT
ACTAGTAATGGGTCCAGTTCACAATCCCAGCAACAGCAGAATAAGCACCAGCCTCTTGCT
AAGAAAAAGAGAAACCTTCCTGGGACTCCTGATCCAAATGCAGAAGTTATCGCCCTATCA
CCAACAACTCTCATGGCGACGAACAGATTCGTGTGTGAGATTTGCAATAAGGGATTTCAG
AGGGACCAAAACTTGCAGTTGCATAGGAGGGGACACAATCTCCCTTGGAAGCTCAGGCAA
AGAACTACAACTGAAGTGAGAAAGCGAGTTTACATATGTCCTGAGCCAACTTGCGTGCAC
CACAATCCGGCTCGTGCTTTGGGTGATCTTACTGGAATTAAAAAACATTATAGCCGTAAA
CATGGAGAAAAGAAATGGAAATGTGATAAATGTTCCAAAAAATATGCCGTGCAGTCTGAT
TGGAAGGCTCACCAAAAGACTTGTGGAACAAGAGAATACAAATGTGACTGTGGTACCATT
TTCTCCAGGAGGGACAGTTTTATCACACATAGAGCTTTCTGTGATGCATTGGCCGAAGAA
AACAACAAAGTGAACCAAAGTCTAATGAACAACATGGATCCCAATTTGCAAAGTGGCCAA
ATGCATGTCCTCATGTCATCAAATGCCTCCTTGGGGTTATCGGACTTCAATAACTTTGAT
CCCAAAACCCCACTAAAATCACTCCCTCAGGAACTTCTTCCCATCCCATTCAAGTCCATG
AACAATAATATGGCTGCAGGTGGCATGTTCTCGACTACTTCAGGTAACCTTTTTGGTAGC
CCAAGAAGTGTAGCGTCATCATCTTCAGGACTTCAACTTAGCTCCAACATCCCATCAAAT
TTCAATTATCTCCAAGACAGTAGTAAAAATGGGACGGTCCAGGGCCAAGCTCCAATGTCA
GCAACTGCACTTTTGCAAAAAGCGGCCCAAATGGGGGCTACTGCTAGTGGTAGTATTAAT
TCTCCTATGATGCAAAAGAGCTTTGTAACAAGTGCAATGGCTGGTCCTTATGTTAGCCCC
TCACCTTATGAGAATTTCCAAACACAACCAGATAATAATCGGCCAAGTTTAGCAGCAGTA
ATGAATGACATGGGAATGTACAGTGGGATACTAATGAGCAATGATCAAAACATTAATGGT
GGATTTGTCAAGAACGTTGCAGAACATGATCAAGAGAATAACAATACAAATGATAGCTCT
AGTGTGATTCGAGTCAGGAACCAAAGTACAGTGTTTGGACACAATGGAAATAATGACATG
TTGACAGTTGATTTCTTAGGAGTTGGAGGATCTTCAAGGCCACCAAGTTTGCACGAGCAA
CAAAGATTGGAAGCAGCTATAAATCAACAAAGGATGCAGGCTAGTGCTATAAATCCGTTC
CATCAACAGAATATTTCACATGGAAATAATTCTGCTATGGAAAAGCCCATATGGGATGTT
TGA

Peptide Sequence

PEP ID

XP_016475004.1
PEP Infomation

PREDICTED: protein indeterminate-domain 2-like [Nicotiana tabacum]
Sequence

MSNISGEEGSFSSGNTGEEVQKHNQAAHLKTSNNISSITSTSNGSSSQSQQQQNKHQPLA
KKKRNLPGTPDPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ
RTTTEVRKRVYICPEPTCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSD
WKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQSLMNNMDPNLQSGQ
MHVLMSSNASLGLSDFNNFDPKTPLKSLPQELLPIPFKSMNNNMAAGGMFSTTSGNLFGS
PRSVASSSSGLQLSSNIPSNFNYLQDSSKNGTVQGQAPMSATALLQKAAQMGATASGSIN
SPMMQKSFVTSAMAGPYVSPSPYENFQTQPDNNRPSLAAVMNDMGMYSGILMSNDQNING
GFVKNVAEHDQENNNTNDSSSVIRVRNQSTVFGHNGNNDMLTVDFLGVGGSSRPPSLHEQ
QRLEAAINQQRMQASAINPFHQQNISHGNNSAMEKPIWDV

Transcript Sequence

Gene sequence data has not been registered.